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Biography

Prior to the position at DPI, I was an associate research professor in the Department of Computer Science and Engineering and a computational scientist in the Center for Research Computing at the University of Notre Dame, Indiana, US. Before I moved to the US, I was a research associate in the Data-Intensive Research Group at the University of Edinburgh, UK, in the area of data-intensive workflows and in the Applied Bioinformatics Group at the University of Tübingen, Germany, in the area of science gateways and grid computing. Additionally, I have perennial experience as a project manager and system developer in industry in the US and Germany. As head of a system programmer group, I have led long-term software projects (e.g. infrastructure on web-based applications). I received my German diploma (equivalent to a Master’s degree) in computer science from extramural studies at the FernUniversität Hagen and my PhD in computer science from the University of Tübingen, Germany.

Research Interests

My research focuses on science gateways, computational workflows as well as distributed and parallel computing which inherently leads to highly interdisciplinary projects. I am the DPI team lead on the Wastewater Epidemiology project, for example. I am especially interested in sustainability of research software, usability of computational methods and reproducibility of research results and I support open science initiatives, i.e., I am an academic editor of PeerJ Computer Science and Frontiers. Sustainability of research software has many facets and I advocate for improving career paths for research software engineers and facilitators and for incentivizing their work via means beyond the traditional academic rewarding system. Community outreach and interdisciplinary events are crucial to contribute to changing academic culture. Thus, I am a founding steering committee member of the U.S. Research Software Engineer Association and founded and have guided the International Workshop on Science Gateways series. I am also passionate about increasing diversity in STEM.

Research Areas

Education

  • Ph.D. in computer science, University of Tübingen, 2013
  • M.S. in computer science, FernUniversität Hagen, 2005 
  • Apprenticeship in Computer Science and Mathematics, Westfaelische University of Muenster, 1994

 

Awards and Honors

  • Chicago Innovation Award, 2022
  • M.S. in computer science, Summa Cum Laude, 2005

 

Additional Campus Affiliations

Visiting research professor, University of California, San Diego

In The News

Recent Publications

Tiwari, A., Prathiba A.P, Gesing, S., and Catlett, C. (2022) Investigating Persistence Surface Urban Heat Island (PSUHI) with respect to the Local Climate Zones (LCZs) in Chicago, USA AGU Fall Meeting 2022, December 2022

Packman, A.I., Poretsky, R., Owens,S., Catlett, C., Grippo, M., Tiwari, A., Shrestha, A., Dorevitch, S., Owen, C., Clements, L., Pierce, M., White, K.,  Gesing, S., Leisman, K., Morton, D., Hartmann, E., Chen, G., Warns, M., Mangan, N., Feng, S., Wells, G., Harkness, A., Jasmin, W., Hart, J. and Ghinai, I. (2022) Pandemic Intelligence: Linking Wastewater Infrastructure, Microbial Ecology, and Hydrological Time-Series Analysis to Provide Population-Level Information for COVID-19 Response AGU Fall Meeting 2022, December 2022

Pierce, M., Zentner, M., Dahan, M., Gesing, S., Stirm, C., Hayden, L.B. (2022) The Science Gateway Community Institute’s Consulting Services Program: Lessons for Research Software Engineering Organizations RSE-HPC-2022 at SC22, November 2022, https://doi.org/10.48550/arXiv.2209.03958

Kee, K.F., Gesing, S., Rugg, A., Bradley, S., Brandt, S.R., Meyers, N.K., Dombrowski, Q. (2022) Science Gateways and Humanities Is a Promising Partnership: Why Is It So Rare? Gateways 2022, October 2022

Gesing, S., Deelman, E., Ferreira da Silva, R., Hildreth, M., McDowell, M. A., Meyers, N., Thain, D. (2022) VisDict: A Visual Dictionary in a Science Gateway Gateways 2022, October 2022

Stirm, C., Zentner, M., Gesing, S. (2022) Revenue Generation for Science Gateways Gateways 2022, October 2022

Tiwari, A., Leisman, K., Shrestha, A., Poretsky, R., Owens, S., Dorevitch, S., Grippo, M., Packman, A.I., Gesing, S., Catlett, C. (2022) A Science Gateway for Wastewater-based Epidemiology – a Case Study of the World’s Largest Wastewater Treatment Plant in Chicago Poster at Gateways 2022, October 2022

Gesing, S. (2022) Roles of Professional Research Software Engineers in the Science Gateway Landscape Research Software Engineers in eScience (RSE-eScience-2022), October 2022

Hong, Neil P. Chue ; Katz, Daniel S. ; Barker, Michelle ; Lamprecht, Anna-Lena ; Martinez, Carlos ; Psomopoulos, Fotis E. ; Harrow, Jen ; Castro, Leyla Jael ; Gruenpeter, Morane ; Martinez, Paula Andrea ; Honeyman, Tom ; Struck, Alexander ; Lee, Allen ; Loewe, Axel ; Werkhoven, Ben van ; Garijo, Daniel ; Plomp, Esther ; Genova, Francoise ; Shanahan, Hugh ; Hellström, Maggie ; Sandström, Malin ; Sinha, Manodeep ; Kuzak, Mateusz ; Herterich, Patricia ; Islam, Sharif ; Sansone, Susanna-Assunta ; Pollard, Tom ; Atmojo, Udayanto Dwi ; Williams, Alan ; Czerniak, Andreas ; Niehues, Anna ; Fouilloux, Anne Claire ; Desinghu, Bala ; Goble, Carole ; Richard, Céline ; Gray, Charles ; Erdmann, Chris ; Nüst, Daniel ; Tartarini, Daniele ; Ranguelova, Elena ; Anzt, Hartwig ; Todorov, Ilian ; McNally, James ; Burnett, Jessica ; Garrido-Sánchez, Julián ; Belhajjame, Khalid ; Sesink, Laurents ; Hwang, Lorraine ; Tovani-Palone, Marcos Roberto ; Wilkinson, Mark D. ; Servillat, Mathieu ; Liffers, Matthias ; Fox, Merc ; Miljković, Nadica ; Lynch, Nick ; Lavanchy, Paula Martinez ; Gesing, Sandra; Stevens, Sarah ; Cuesta, Sergio Martinez ; Peroni, Silvio ; Soiland-Reyes, Stian ; Bakker, Tom ; Rabemanantsoa, Tovo ; Sochat, Vanessa ; Yehudi, Yo ; WG, FAIR4RS. (2022) FAIR Principles for Research Software (FAIR4RS Principles). Manchester output report.

Carver, J.C., Weber, N., Ram, K., Gesing, S., Katz, D.S.. (2022). A survey of the state of the practice for research software in the United States PeerJ Computer Science 8:e963, https://doi.org/10.7717/peerj-cs.963

Pierantoni, G., Kiss, T., Bolotov, A., Kagialis, D., Deslauriers, J., Ullah, A., Chen, H., Chan You Fee, D., Dang, H., Kovacs, J., Belehaki, A., Herekakis, T., Tsagouri, I. and Gesing, S. (2022) Towards a Reference Architecture based Science Gateway Framework with Embedded E-Learning Support Concurrency and Computation: Practice & Experience, January 2022

Gesing, S., Stirm, C., Klimeck, G., Zentner, L., Wang, S., Villegas Martinez, B.M., Diaz Eaton, C., Donovan, S., Zhao, L. , Song, C., Kim, I.L., Strachan, A., Zentner, M. and Kalyanam, R. (2022) Open Science via HUBzero: Exploring Five Science Gateways Supporting and Growing their Open Science Communities Proc. of HICSS-55 (55th Hawaii International Conference on System Sciences), Open Science Practices in Information Systems Research, January 2022, http://hdl.handle.net/10125/79420

Casanova, H., Deelman, E., Gesing, S., Hildreth, M., Hudson, S., Koch, W., Larson, J., McDowell, M. A., Meyers, N., Navarro, J.-L., Papadimitriou, G., Tanaka, R., Taylor, I., Thain, D., Wild, S. M., Filgueira, R., & Ferreira da Silva, R. (2021). Emerging Frameworks for Advancing Scientific Workflows Research, Development, and Education2021 IEEE Workshop on Workflows in Support of Large-Scale Science (WORKS), 74–80. https://doi.org/10.1109/WORKS54523.2021.00015

Gesing, S., Dahan M., Hayden, L., Pierce, M., Stirm, C., and Zentner, M. (2021) SGCI: Advancing Access to Scientific Software via Science Gateways Improves the Trust within the Computational Sciences Landscape Workshop on the Science of Scientific-Software Development and Use, December 2021

Gesing, S., Carver, Jeffrey C., Cosden, I., Damerow, J., Ferenbaugh, C., Hill, C., Katz, D.S., Maimone, C., and Parsons, L. (2021) The US-RSE Association: Accelerating Changes in the Scientific-Computing Community to Improve Practices for Software Development and Use Workshop on the Science of Scientific-Software Development and Use, December 2021

Stirm, C., Gesing, S., Zentner, M., Klimeck, G., Zentner, L. and Dearborn, C. (2021) HUBzero’s Variations of Sustainability: From Simulation/Modeling Tools to Communities IWSG 2019 (11th International Workshop on Science Gateways), 12-14 June 2019, Ljubljana, Slovenia CEUR Workshop Proceedings, online http://ceur-ws.org/Vol-2975/paper6.pdf

Stankovski, V. and Gesing, S. (eds) (2021) IWSG 2019 – International Workshop on Science Gateways 2019 CEUR Workshop Proceedings, online http://ceur-ws.org/Vol-2975/

Andreev, A., Morrell, T., Briney, K., Gesing, S., and Manor, U. (2021), Biologists need modern data infrastructure on campus, URL: https://arxiv.org/abs/2108.07631

Ferreira da Silva, R. , Casanova, H., Chard, K., Coleman, T., Laney, D., Ahn, D. H., Jha, S., Howell, D., Soiland-Reyes, S., Altintas, I., Thain, D., Filgueira, R., Babuji,Y. N., Badia, R. M., Balis, B., Caíno-Lores, S., Callaghan, S., Coppens, F., Crusoe,M. R., De, K., Natale, F. D., Do, T. M. A., Enders, B., Fahringer, T., Fouilloux, A.,Fursin, G., Gaignard, A., Ganose, A., Garijo, D., Gesing, S., Goble, C. A., Hasan,A., Huber, S., Katz, D. S., Leser, U., Lowe, D., Ludäscher, B., Maheshwari, K.,Malawski, M., Mayani, R., Mehta, K., Merzky, A., Munson, T. S., Ozik, J., Pottier,L., Ristov, S., Roozmeh, M., Souza, R., Suter, F., Tovar, B., Turilli, M., Vahi, K.,Vidal-Torreira, A., Whitcup, W. R., Wilde, M., Williams, A., Wolf, M. and Wozniak,J. M. (2021), Workflows community summit: Advancing the state-of-the-art ofscientific workflows management systems research and development CoRRabs/2106.05177. URL:https://arxiv.org/abs/2106.05177

Gesing, S., Brandt, S., Bradley, S., Potkewitz, M., Kee, K., Whysel, N., Perri, M., Cleveland, S., Rugg, A. and Smith, J. (2021) A Vision for Science Gateways: Bridging the Gap and Broadening the Outreach Practice and Experience in Advanced Research Computing. Association for Computing Machinery, New York, NY, USA, Article 1, 1–8. DOI:https://doi.org/10.1145/3437359.3465579

Neeman, H., Rivera, L., DeStefano, L., Al-Azzawi, H., Brunson, D., Clemins, P.J., Colbry, D., Frye, C., Gesing, S., Gyllinsky, J.V., Klimaszewski-Patterson, A., Phataralaoha, A., Price, T., Tanash, M. and Voss, D. (2021) An Evaluation of Cyberinfrastructure Facilitators Skills Training in the Virtual Residency Program Practice and Experience in Advanced Research Computing. Association for Computing Machinery, New York, NY, USA, Article 53, 1–7. DOI:https://doi.org/10.1145/3437359.3465560

Gesing, S., Meyers, N., Johnson, R. and Wang, J. (2021) PresQT Services – A Path Forward for Connecting Platforms While Increasing Quality and FAIRness of Data and Software US-RSE Virtual Workshop 2021

Gesing, S., Stirm, C., Zentner, M. (2021) HUBzero – Achieving Software Sustainability for a Science Gateway Framework Collaborations Workshop 21, March 30 – April 1, 2021

Gesing, S., Meyers, N., Johnson, R. and Wang, J. (2021) PresQT – Services to Improve Re-use and FAIRness of Research Data and Software Collaborations Workshop 21, March 30 – April 1, 2021

Carver, J., Cosden, I., Hill, C., Gesing, S., Katz, D.S.(2021) Sustaining Research Software via Research Software Engineers and Professional Associations ICSE 2021 BokSS Workshop, June 2021, arXiv:2103.01880 [cs.SE]

Katz, D., Carver, J., Chue Hong, N., Gesing, S., Hettrick, S., Honeyman, T., Ram, K., Weber, N. (2021) Addressing Research Software Sustainability via Institutes ICSE 2021 BokSS Workshop, June 2021, arXiv:2103.03690 [cs.SE]

Stirm, C., Snodgrass, N., Gesing, S., Zentner, M. (2021) Minisymposterium: Establishing Online Science Communities – Three Science Gateway Examples SIAM CSE21, March 2021

Parsons, L., Cosden, I., Carver, J., Ferenbaugh, C., Gesing, S., Hill, C., Katz, D.S., Maimone, C., Perr-Sauer, J. (2021) Minisymposterium: Sustainable Software through Stronger Community  SIAM CSE21, March 2021

Tettegah, S., Gesing, S., Ferreira da Silva, R., Jiang, Y., Craig, A.B. (2021) How to Enhance Diversity in Software Engineering Teams? SIAM CSE21, March 2021

Cosden, I., Carver, J., Ferenbaugh, C., Gesing, S., Hill, C., Katz, D.S., Maimone, C., Parsons, L., Perr-Sauer, J. (2021) The US-RSE Association: A Community-Driven National Organization of Research Software Engineers SIAM CSE21, March 2021

Ferreira da Silva, R. Gesing, S., Sakellariou, R., Taylor, I. (eds.) (2021) Special issue on workflows in support of large-scale science  Future Generation Computer Systems, volume 118, 2021, Pages 73-74

Austin CC, Bernier A, Bezuidenhout L, Bicarregui J, Biro T, Cambon-Thomsen A, Carroll SR, Cournia Z, Dabrowski PW, Diallo G, Duflot T, Garcia L, Gesing, S., Gonzalez-Beltran A, Gururaj A, Harrower N, Lin D, Medeiros C, Méndez E, Meyers N, Mietchen D, Nagrani R, Nilsonne G, Parker S, Pickering B, Pienta A, Polydoratou P, Psomopoulos F, Rennes S, Rowe R, Sansone SA, Shanahan H, Sitz L, Stocks J, Tovani-Palone MR, Uhlmansiek M (2020) Research Data Alliance. Fostering global data sharing: highlighting the recommendations of the Research Data Alliance COVID-19 working group.Wellcome Open Res. 2020 Nov 9;5:267. doi: 10.12688/wellcomeopenres.16378.1. PMID: 33501381; PMCID: PMC7808050.

Calyam, P., Wilkins-Diehr, N., Miller, M. Brookes, E., Arora, R., Chourasia, A., Jennewein, D., Nandigam, V., Lamar, M. D., Cleveland, S., Newman, G., Wang, S., Zaslavsky, I., Cianfrocco, M., Ellett, K., Tarboton, D., Jeffery, K., Zhao, Z., González-Aranda, J., Perri, M., Tucker, G., Candela, L., Kiss, T. and Gesing, S. (2020) Measuring Success for a Future Vision: Defining Impact in Science Gateways/Virtual Research Environments Concurrency and Computation, 2020;e6099. doi. https://doi.org/10.1002/cpe.6099

Gesing, S., Meyers, N., Johnson, R. and Wang, J. (2020) Improving the Publication and Re-Use of Data via PresQT Tools and Services  AGU Conference, December 2020.

Gesing, S., Graves, J.B. and Zentner, M. (2020) Hubdrive: Enhancing HUBzero© for Offline Data Sharing In: EGI Conference, November 2020.

Graves, J.B., Gesing, S. and Zentner, M. (2020) Hubdrive: Supporting Seamlessly Peer-to-Peer Data Sharing In: EGI Conference, November 2020.

Gesing, S., Cleveland, S.B., Bradley, S. and Corwin, B. (2020) How to Build and Engage with Your Community In: Gateways, October 2020, virtual.

Parsons, P., Chen, Y., Ho, Y., Groothuis, K., Dentler, B., Stirm, C., Gesing, S. and Zentner, M. (2020) Common Usability Problems and Solutions for Science Gateways In: Gateways, October 2020, virtual.

Jay, C., Haines, R., Katz, D.S., Carver, J., Gesing, S., Brandt, S.R., Howison, J., Dubey, A., Phillips, J.C., Wan, H., and Turk, M. (2020) The Challenges of Theory-Software Translation F1000Research 2020, 9:1192, doi: https://doi.org/10.12688/f1000research.25561.1

RDA COVID-19 Working Group. (2020) Recommendations and Guidelines on Data Sharing Research Data Alliance, 2020. DOI: https://doi.org/10.15497/rda00052

Neeman, H., Akin, D., Al-Azzawi, H., Brandt, K.L., Brooks Kieffer, J., Brunson, D., Colbry, D.,  Gesing, S., Klimaszewski-Patterson, A., Mizumoto, C., Pine-Thomas, J. A., Schwartz, A. Z., Severini, H., Voss, D. and Tanash, M. (2020) Cyberinfrastructure Facilitation Skills Training via the Virtual Residency Program In Proceedings of the Practice and Experience in Advanced Research Computing 2020 (PEARC’20), Portland, Oregon USA, 2020, pp. 421-428, doi: https://doi.org/10.1145/3311790.3396629

Parsons, P., Gesing, S., Stirm, C. and Zentner, M. (2020) SGCI Incubator and Its Role in Workforce Development: Lessons Learned from Training, Consultancy, and Building a Community of Community-Builders for Science Gateways In Proceedings of the Practice and Experience in Advanced Research Computing 2020 (PEARC’20), Portland, Oregon USA, July 2020, pp. 491-494, doi: https://doi.org/10.1145/3311790.3400850

Gesing, S. Increasing Developer Productivity by Assigning Well-Defined Roles in Teams Collegeville Workshop 2020, virtual, 2 pages, 2020

Benham, D. and Gesing, S. (2020) HUBzero© Goes OneSciencePlace: The Next Community-Driven Steps for Providing Software-as-a-Service 2019 15th International Conference on eScience (eScience), San Diego, CA, USA, 2019, pp. 642-643, doi: 10.1109/eScience.2019.00097.

Brower, D., Gesing, S., Johnson, R., Meyers, N., Meyerson, J. and Narlock, M. (2020) ATG Special Report – On Institutional Repositories, “Beyond the Repository Services,” their Content, Maintainers, and Stakeholders Against the Grain, April 2020

Dahan, M., Gesing, S. and Pirzl, R. (eds.) (2020) Special Issue on Science Gateway Workshops Special Issue 2017 Future Generation Computer Systems, volume 98, pages 154-322, 2020

Saxena, A., Joshi, R., Darbari, H., Mazurek, C., Bhat, A., Srivastava, A., Wojkovich, K., Buetow, K. and Gesing, S. (2020) The ICTBioMed NCIP Hub: Cancer research in a science gateway consortium Future Generation Computer Systems. Volume 105, April 2020, pp. 27-32

Abramson, D., Pierce, M. and Gesing, S. (eds.) (2019) Special issue on Science Gateways 2016 Future Generation Computer Systems, volume 94, pages 801-956, 2019

Jay, C., Haines, R., Katz, D.S., Carver, J., Phillips, J.C., Dubey, A., Gesing, S., Turk, M., Wan, H., van Dam, H., Howison, J., Morozov, V. and Brandt, S.R. (2019) Theory-Software Translation: Research Challenges and Future Directions arXiv:1910.09902 [cs.SE]

Gesing, S., Brazil, M., Brunson, D., Cosden, I., Crawford, T.D. Ferreira da Silva, R., Katz, D.S. and Neeman, H. (2019) Panel: Sustainability of HPC Research Computing: Fostering Career Paths for Facilitators, Research Software Engineers, and Gateway Creators  SC19, 17-22 November 2019, Denver, CO, USA

Gesing, S., Pierce, M., Dahan, M, Rice, R., Chard, K., Miller, M. and Clements, D. (2019) Plenary Panel: Effective Checklists for Developers and Researchers to Gather Requirements for Science Gateways Gateways 2019, San Diego, CA, USA, 23-25 September 2019

Gesing, S., Cosden, I. and Ferenbaugh, C. (2019) Building a Community of Research Software Engineers BoF at PEARC ’19: Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), Chicago, IL, 2019, July 28 – August 1, 2019

Gesing, S., Stirm, C., Zentner, M., Haley, B., Clark, S., and HUBzero Team (2019) HUBzero®: Novel Concepts Applied to Established Computing Infrastructures to Address Communities’ Needs PEARC ’19: Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), Chicago, IL, 2019, July 28 – August 1, 2019

Neeman, H., Al-Azzawi, H.M., Brunson, D., Burke, W., Colbry, D., Falgout, J.T., Ferguson, J.W., Gesing, S., Gyllinsky, J., Simmons, C.S., Simms, J.L., Tanash, M., Voss, D., Wells, J., and Yockel, S. (2019) Cultivating the Cyberinfrastructure Workforce via an Intermediate/Advanced Virtual Residency Workshop PEARC ’19: Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), Chicago, IL, 2019, July 28 – August 1, 2019

Gesing, S. and Ferreira da Silva, R. (2019) 2019 IEEE/ACM Workflows in Support of Large-Scale Science (WORKS) IEEE Xplore

Gesing, S., Dahan, M., Zentner, M., Wilkins-Diehr, N. and Lawrence, K. (2019) The Science Gateways Community Institute: Collaborations and efforts on international scale Future Generation Computer Systems, Volume 101, December 2019, Pages 951-958

Gesing, S., Benham, D.R. and the HUBzero© team (2019)OneSciencePlace: Sustainability Measures for a Science Gateway Framework 2019 Collegeville Workshop on Sustainable Scientific Software (CW3S19), Collegeville, MN, USA, 22-24 July 2019

Stirm, C., Zink, R., Gesing, S., Zentner, M., and Junk, D.. (2019) REMEDI central – expanding and sustaining a medical device community Future Generation Computer Systems, Volume 101, December 2019, Pages 372-380

Gesing, S., Wilkins-Diehr, N., Dahan, M., Zentner, M. and Lawrence, K.(2019) The Science Gateways Community Institute: Going Beyond Borders IWSG 2017 (9th International Workshop on Science Gateways), 19-21 June 2017, Poznan, Poland

Gesing, S., Kurowski, K., Kiss, T. (2019) IWSG 2017 – International Workshop on Science Gateways 2017 CEUR Workshop Proceedings, online http://ceur-ws.org/Vol-2363/

Atkinson, M. and Gesing, S. (2019) IWSG 2018 – International Workshop on Science Gateways 2018 CEUR Workshop Proceedings, online http://ceur-ws.org/Vol-2357/

Stirm, C., Zink, R. and Gesing, S. (2019) REMEDI – Tactics of Expanding a Science Gateway Community Proc. of IWSG 2018 (10th International Workshop on Science Gateways), 13-15 June 2018, Edinburgh, Scotland, http://ceur-ws.org/Vol-2357/paper1.pdf

Pierce, M., Miller, M., Brookes, E., Wong, M., Liu, Y., Afgan, E., Gesing, S., Dahan, M., Marru, S. and Walker, T. (2019) Towards a Science Gateway Reference Architecture Proc. of IWSG 2018 (10th International Workshop on Science Gateways), 13-15 June 2018, Edinburgh, Scotland, http://ceur-ws.org/Vol-2357/paper6.pdf

Gesing, S. (2019) SGCI and the conceptualization of URSSI: Addressing challenges in software sustainability Spring 2019 ACS National Meeting, Orlando, FL, March 31 – April 4, 2019

Katz, D.S., Aerts, P., Chue Hong, N., Dubey, A., Gesing, S., Neeman, H., Pearah, D. (2019) Sustaining Research Software: an SC18 Panel arXiv:1902.08942 [cs.SE]

Barker, M., Olabarriaga, S., Wilkins-Diehr, N., Gesing, S., Katz, D.S., Shahand, S., Henwood, S., Glatard, T., Jeffery, K., Corrie, B., Glaves, H., Wyborn, L., Hong, N.C., and Costa, A. (2019) The Global Impact of Science Gateways, Virtual Research Environments and Virtual Laboratories Future Generation Computer Systems

Gesing, S., Lawrence, K., Dahan, M., Pierce, M.E., Wilkins-Diehr, N. and Zentner, M. (2019) Science gateways: Sustainability via on-campus teams Future Generation Computer Systems, volume 94, pages 97-102, May 2019.

Banegas-Luna, A.J., Imbernon, B., Llanes Castro, A., Perez-Garrido, A., Ceron-Carrasco, J.P., Gesing, S., Merelli, I., D’Agostino, D. and Perez-Sanchez, Horacio (2019) Advances in distributed computing with modern drug discovery Expert Opinion on Drug Discovery, 14(1):9-22, 2019, doi:10.1080/17460441.2019.1552936

Gesing, S. and Ferreira da Silva, R. (2018) 2018 IEEE/ACM Workflows in Support of Large-Scale Science (WORKS) IEEE Xplore

Katz, D. S., McInnes, L.C., Bernholdt, D.E., Mayes, A.C., Hong, N.P.C, Duckles, J., Gesing, S., Heroux, M.A., Hettrick, S., Jimenez, R.C., Pierce, M., Weaver, B. and Wilkins-Diehr, N. (2018)  Community Organizations: Changing the Culture in Which Research Software Is Developed and Sustained  Computing in Science & Engineering, doi: 10.1109/MCSE.2018.2883051

Meyers, N.K., Gesing, S., Wang, Z. and Johnson, R. (2018)  Tools and RESTful Services to Improve Preservation and Re-use of Research Data & Software AGU Fall Meeting 2018, December 10-14, 2018, Washington, DC, USA

Stirm, C., Zentner, M., Casavan, J., Hoebelheinrich, N., Craddock, R.C., Cleveland, S., Gesing, S. and Escherich, A. (2018) Science Gateways Community Institute Incubator Pitch Deck: Success Stories from the 2nd & 3rd Bootcamp Gateways 2018, Austin, TX, USA, September 25-27, 2018.

Gesing, S., Zentner, M. and Stirm, C. (2018) Science Gateways Community Institute: Developing Strategies for Sustainability of Projects via Bootcamps Digital Infrastructures for Research 2018, Lisbon, Portugal, October 9-11, 2018.

Zentner, M., Delgado Olabarriaga, S. and Gesing, S. (2018) Business or Research Project? A case study of the evolving business model of HUBzero Digital Infrastructures for Research 2018, Lisbon, Portugal, October 9-11, 2018.

Neeman, H., Al-Azzawi, H.M., Bergstrom, A., Braiterman, Z.K., Brunson, D., Colbry, D., Colmenares, E., Fuller, A.N., Gesing, S., Kalyvaki, M., Mizumoto, C., Park, J., Schwartz, A.Z., Simms, J.L. and Vania, R. (2018) Progress Update on the Development and Implementation of the Advanced Cyberinfrastructure Research & Education Facilitators Virtual Residency Program PEARC ’18 Proceedings of the Practice and Experience on Advanced Research Computing, Article No. 71, Pittsburgh, PA, USA, July 22 – 26, 2018, DOI: 10.1145/3219104.3219117

Carver, J., Gesing, S., Katz, D.S., Ram, K. and Weber, N. (2018) Conceptualization of a US Research Software Sustainability Institute (URSSI) IEEE Computing in Science & Engineering, Volume: 20, Issue: 3, pp. 4-9, 2018, DOI: 10.1109/MCSE.2018.03221924

Katz, D.S., Niemeyer, K., Gesing, S., Hwang, L., Bangerth, W., Hettrick, S., Idaszak, R., Salac, J., Chue Hong, N., Nunez-Corrales, S., Allen,A., Geiger, R.S., Miller, J., Chen, E., Dubey, A., Lago, P (2018) Fourth Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE4) Journal of Open Research Software, 6(1), p.10. DOI: http://doi.org/10.5334/jors.184

Gesing, S. (2018) Science Gateways in HPC: Usability Meets Efficiency and Effectiveness In: Modeling and Simulation in HPC and Cloud Systems, Book Series “Studies in Big Data”  Print ISBN: 978-3-319-73766-9, Electronic ISBN: 978-3-319-73767-6, Springer International Publishing

Gesing, S., Dooley, R., Pierce, M., Krüger, J., Grunzke, R., Herres-Pawlis, S. and Hoffmann, A. (2017) Gathering Requirements for Advancing Simulations in HPC Infrastructures via Science Gateways  Future Generation Computer Systems, https://doi.org/10.1016/j.future.2017.02.042

Gesing, S., Zentner, M., Casavan, J., Hillery, B., Vorvoreanu, M., Heiland, R., Marru, S., Pierce, M., Mullinix, N., Maron, N. (2017) Science Gateways Incubator: Software Sustainability Meets Community Needs 2017 IEEE 13th International Conference on e-Science (e-Science), Auckland, 2017, pp. 477-485. doi:10.1109/eScience.2017.77

Olabarriaga, S., Gesing, S., Stirm, C., Shawn, R., and Zentner, M. (2017) HUBzero Platform as Brick for Open Science Construction Digital Infrastructures for Research 2017, 30 November – 1 December 2017, Brussels, Belgium

Montagnat, J., Taylor, I., Gesing, S. and Sakellariou, R. (eds.)(2017) Proceedings of the 12th Workshop on Workflows in Support of Large-Scale Science ACM, SC17, Denver, Colorado, 2017, ISBN 978-1-4503-5129-4

Gesing, S., Lawrence, K., Wilkins-Diehr, N., Dahan, M., Zentner, M., Pierce, M. (2017) Science Gateways: Sustainability via On-Campus Teams Gateways 2017, 23-25 October, Ann Arbor, USA, https://doi.org/10.6084/m9.figshare.5483566.v1

Gesing, S., Zentner, M., Casavan, J., Heiland, R., Hillery, B., Marru, S., Pierce, M., Maron, N., Mullinix, N., Vorvoreanu, M. (2017)  Science Gateways Bootcamp: Strategies for Developing, Operating and Sustaining Science Gateways IWSG-A 2017 (International Workshop on Science Gateways – Australia), 16-17 October 2017, Brisbane, Australia

Saxena, A., Joshi, R., Darbari, H., Zentner, M., Wojkivich, K., Bhat, A., Srivastava, A., Buetow, K., Mazurek, C., and Gesing, S. (2017)  ICTBioMed NCIP Science Gateway: A Hub for Collaborative Cancer Research  Poster at Gateways 2017, 23-25 October, Ann Arbor, USA, https://doi.org/10.6084/m9.figshare.5483389.v2

Saxena, A., Joshi, R., Darbari, H., Mazurek, C., Bhat, A., Srivastava, A., Wojkovich, K., Buetow, K. and Gesing, S. (2017)  The ICTBioMed NCIP Hub: Cancer Research in a Science Gateway on World-Wide Scale  IWSG 2017 (9th International Workshop on Science Gateways), 19-21 June 2017, Poznan, Poland

Löffler, F., Katz, D.S., Wilson, L.A., Gesing, S., McDougall, D., Carver, J., Brandt, S.R. (2017) Research Software Training Initiative: Identifying and addressing challenges in scientific software development Future Needs for Advanced Cyberinfrastructure to Support Science and Engineering Research (NSF CI 2030)

Katz, D.S., Haines, R., Huff, K., Löffler, F., Pierce, M., Heroux, M., Niemeyer, K., Gesing, S., Carver, J., Wilson, G. (2017) Sustaining Software as a Key Element of Cyberinfrastructure Future Needs for Advanced Cyberinfrastructure to Support Science and Engineering Research (NSF CI 2030)

Pierantoni, G., Frost, D., Gesing, S., Olabarriaga, S., Tertyanzsky, G., Jaghoori, M., and Arshad, J. (2017)  A Model for Information and Action Flows Connecting Science Gateways to Distributed Computing Infrastructures Proc. of IWSG 2016 (8th International Workshop on Science Gateways), 8-10 June 2016, Rome, Italy, http://ceur-ws.org/Vol-1871/paper1.pdf

Gesing, S. and Krüger, J. (eds.) (2017)  IWSG 2016 – International Workshop on Science Gateways 2016 CEUR Workshop Proceedings, online http://ceur-ws.org/Vol-1871/

Atkinson, M., Gesing, S., Montagnat, J. and Taylor, I. (2017)  Scientific Workflows: Past, Present and Future Future Generation Computer Systems, volume 75, pages 216-227, 2017

Wilkins-Diehr, N., Barker M. and Gesing, S. (2017) Science Gateways, Virtual Labs and Virtual Research Environments eResearch Conference Australasia 2016, 10-14 October 2016, Melbourne, Australia

Katz, D. S., Niemeyer, K. E., Gesing, S., Hwang, L., Bangerth, W., Hettrick, S., Idaszak, R., Salac, J., Chue Hong, N., Corrales, S. N., Allen, A., Geiger, R. S., Miller, J., Chen, E., Dubey, A., Lago, P. (2017) Report on the Fourth Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE4) arXiv:1602.02296 [cs.SE]

Gesing, S., Zentner, M., Dahan, M. and Lawrence, K. (2017)  Gateways to Science: Harnessing Big Data and Open Data for Precision Medicine Book of Abstracts – 2nd Personalized Medicine Conference, pages 55-57, 17 – 20 Mar 2017, Cancun, Mexico

Gesing, S. and Sakellariou, R. (eds.) (2017)  WORKS 2016 – Workshop on Workflows in Support of Large-Scale Science CEUR Workshop Proceedings, ISSN 1613-0073.

Gesing, S., Carretero, J., Garcia Blas, J. and Montagnat, J. (2017) Boosting Analyses in the Life Sciences via Clusters, Grids and Clouds Future Generation Computer Systems, volume 67, pages 325-328, 2017

Gesing, S., Carretero, J., Garcia Blas, J. and Montagnat, J. (eds.) (2017) Special issue of Boosting Analyses in the Life Sciences via Clusters, Grids and Clouds Future Generation Computer Systems, volume 67, pages 325-489, 2017

Gesing, S., Wilkins-Diehr, N., Dahan, M., Lawrence, K., Zentner, M., Pierce, M., Hayden, L.B., and Marru, S. (2017) Science Gateways: The Long Road to the Birth of an Institute Proc. of HICSS-50 (50th Hawaii International Conference on System Sciences), 4-7 January 2017, Hilton Waikoloa, HI, USA, http://hdl.handle.net/10125/41919

 

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